Protein Details: Gamma-aminobutyric acid receptor subunit alpha-2

Protein ID

ICDB_Pro_0542

Protein Name

Gamma-aminobutyric acid receptor subunit alpha-2

Gene Name

GABRA2

Organism

Homo sapiens (Human)

Length

451 amino acids

AlphaFoldDB

AF-P47869-F1-model_v4.pdb

Function

Alpha subunit of the heteropentameric ligand-gated chloride channel gated by gamma-aminobutyric acid (GABA);a major inhibitory neurotransmitter in the brain. GABA-gated chloride channels;also named GABA(A) receptors (GABAAR);consist of five subunits arranged around a central pore and contain GABA active binding site(s) located at the alpha and beta subunit interfaces (By similarity). When activated by GABA;GABAARs selectively allow the flow of chloride anions across the cell membrane down their electrochemical gradient. Chloride influx into the postsynaptic neuron following GABAAR opening decreases the neuron ability to generate a new action potential;thereby reducing nerve transmission (By similarity). The alpha-2 subunit exhibits synaptogenic activity together with beta-2 and very little to no activity together with beta-3;the gamma-2 subunit being necessary but not sufficient to induce rapid synaptic contacts formation (By similarity).

Sequence

MKTKLNIYNMQFLLFVFLVWDPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEKASVMIQNNAYAVAVANYAPNLSKDPVLSTISKSATTPEPNKKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWATYLNREPVLGVSP

PDB Structures

Ligand Binding

1. DICL_CP

2. DICL_Pep

Binding Site

BINDING 94; /ligand="4-aminobutanoate": "ligand shared with the neighboring beta subunit"; BINDING 157; /ligand="4-aminobutanoate": "ligand shared with the neighboring beta subunit"

Disease

Developmental And Epileptic Encephalopathy and Alcohol Dependence

Location

DOI ID

10.1038/nature03466; 10.1038/ng1285; 10.1073/pnas.96.17.9891; 10.1086/383283; 10.1093/braiwy171; 10.1016/j.ejpn.2017.12.017; 10.1093/braiwz079

RefSeq

NP_000798.2 [P47869-1]; NP_001107647.1 [P47869-1]; NP_001273756.1 [P47869-2]; NP_001317619.1; XP_016863471.1; XP_016863472.1

Feature